Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 10908
Gene Symbol: PNPLA6
PNPLA6
0.390 GeneticVariation disease BEFREE Loss-of-function mutations in the human NTE gene have been associated with a spectrum of neurodegenerative disorders such as hereditary spastic paraplegia, ataxia and chorioretinal dystrophy. 31835418 2019
Entrez Id: 83636
Gene Symbol: C19orf12
C19orf12
0.110 Biomarker disease BEFREE Genetic analysis along with thorough clinical analysis supported by radiological findings will aid the differential diagnosis of MPAN within the neurodegeneration with brain iron accumulation spectrum as well as other disorders including hereditary spastic paraplegia. 31804703 2019
Entrez Id: 547
Gene Symbol: KIF1A
KIF1A
0.380 GeneticVariation disease BEFREE Pathogenic variants in KIF1A (kinesin family member 1A) gene have been associated with hereditary spastic paraplegia (HSP) type 30 (SPG30), encopassing autosomal dominant and recessive, pure and complicated forms. 31796088 2019
Entrez Id: 6683
Gene Symbol: SPAST
SPAST
0.400 GeneticVariation disease BEFREE Novel mutations in the SPAST gene cause hereditary spastic paraplegia. 31751864 2019
Entrez Id: 476
Gene Symbol: ATP1A1
ATP1A1
0.010 GeneticVariation disease BEFREE Here, we describe the first case of hereditary spastic paraplegia (HSP) caused by a novel de novo (p.L337P) variant in ATP1A1. 31705535 2020
Entrez Id: 6683
Gene Symbol: SPAST
SPAST
0.400 GeneticVariation disease BEFREE An extensive genetic analysis identified a specific class of heterozygous germline mutation in SPAST, p.(Arg499His), which is responsible for hereditary spastic paraplegia with infantile onset. 31698101 2019
Entrez Id: 51271
Gene Symbol: UBAP1
UBAP1
0.340 GeneticVariation disease BEFREE Truncating variants in UBAP1 associated with childhood-onset nonsyndromic hereditary spastic paraplegia. 31696996 2020
Entrez Id: 5833
Gene Symbol: PCYT2
PCYT2
0.010 Biomarker disease BEFREE In conclusion, our data establish PCYT2 as a disease gene for a new complex hereditary spastic paraplegia and confirm that etherlipid homeostasis is important for the development and function of the brain. 31637422 2019
Entrez Id: 11160
Gene Symbol: ERLIN2
ERLIN2
0.430 GeneticVariation disease BEFREE Mutations in genes encoding the neuronal isoform of the inositol 1,4,5-trisphosphate receptor (ITPR1) and genes involved in inositol 1,4,5-trisphosphate receptor degradation (ERLIN1, ERLIN2) are known to cause hereditary spastic paraplegia (HSP) and cerebellar ataxia. 31636353 2019
Entrez Id: 10613
Gene Symbol: ERLIN1
ERLIN1
0.320 GeneticVariation disease BEFREE Mutations in genes encoding the neuronal isoform of the inositol 1,4,5-trisphosphate receptor (ITPR1) and genes involved in inositol 1,4,5-trisphosphate receptor degradation (ERLIN1, ERLIN2) are known to cause hereditary spastic paraplegia (HSP) and cerebellar ataxia. 31636353 2019
Entrez Id: 3708
Gene Symbol: ITPR1
ITPR1
0.010 Biomarker disease BEFREE Mutations in genes encoding the neuronal isoform of the inositol 1,4,5-trisphosphate receptor (ITPR1) and genes involved in inositol 1,4,5-trisphosphate receptor degradation (ERLIN1, ERLIN2) are known to cause hereditary spastic paraplegia (HSP) and cerebellar ataxia. 31636353 2019
Entrez Id: 81790
Gene Symbol: RNF170
RNF170
0.010 GeneticVariation disease BEFREE Bi-allelic variants in RNF170 are associated with hereditary spastic paraplegia. 31636353 2019
Entrez Id: 84188
Gene Symbol: FAR1
FAR1
0.010 Biomarker disease BEFREE Going Too Far Is the Same as Falling Short<sup>†</sup>: Kinesin-3 Family Members in Hereditary Spastic Paraplegia. 31616253 2019
Entrez Id: 6683
Gene Symbol: SPAST
SPAST
0.400 Biomarker disease BEFREE Mutational Spectrum of Spast (Spg4) and Atl1 (Spg3a) Genes In Russian Patients With Hereditary Spastic Paraplegia. 31594988 2019
Entrez Id: 51062
Gene Symbol: ATL1
ATL1
0.400 Biomarker disease BEFREE Mutational Spectrum of Spast (Spg4) and Atl1 (Spg3a) Genes In Russian Patients With Hereditary Spastic Paraplegia. 31594988 2019
Entrez Id: 6683
Gene Symbol: SPAST
SPAST
0.400 GeneticVariation disease BEFREE Mutations in the gene encoding the microtubule severing ATPase spastin are the most frequent cause of hereditary spastic paraplegia, a genetic condition characterised by length-dependent axonal degeneration. 31587092 2019
Entrez Id: 23431
Gene Symbol: AP4E1
AP4E1
0.020 Biomarker disease BEFREE Bi-allelic variants in the subunits of the adaptor protein complex 4 lead to childhood-onset, complex hereditary spastic paraplegia (AP-4-HSP): SPG47 (AP4B1), SPG50 (AP4M1), SPG51 (AP4E1), and SPG52 (AP4S1). 31525725 2019
Entrez Id: 9179
Gene Symbol: AP4M1
AP4M1
0.020 Biomarker disease BEFREE Bi-allelic variants in the subunits of the adaptor protein complex 4 lead to childhood-onset, complex hereditary spastic paraplegia (AP-4-HSP): SPG47 (AP4B1), SPG50 (AP4M1), SPG51 (AP4E1), and SPG52 (AP4S1). 31525725 2019
Entrez Id: 11154
Gene Symbol: AP4S1
AP4S1
0.010 Biomarker disease BEFREE Bi-allelic variants in the subunits of the adaptor protein complex 4 lead to childhood-onset, complex hereditary spastic paraplegia (AP-4-HSP): SPG47 (AP4B1), SPG50 (AP4M1), SPG51 (AP4E1), and SPG52 (AP4S1). 31525725 2019
Entrez Id: 51271
Gene Symbol: UBAP1
UBAP1
0.340 GeneticVariation disease BEFREE We identified three novel heterozygous loss of function mutations (c.425_426delAG, c.312delC, and c.535G>T) in the UBAP1 gene as the genetic cause of a new type of HSP (SPG80). 31515522 2019
Entrez Id: 547
Gene Symbol: KIF1A
KIF1A
0.380 GeneticVariation disease BEFREE In this study, we established in vitro motility assays with purified full-length human KIF1A and found that <i>KIF1A</i> mutations associated with the hereditary SPG lead to hyperactivation of KIF1A motility. 31455732 2019
Entrez Id: 3329
Gene Symbol: HSPD1
HSPD1
0.260 GeneticVariation disease BEFREE An hsp60 D3G mutation leads to MitCHAP-60, an early onset neurodegenerative disease while hsp60 V72I has been linked to SPG13, a form of hereditary spastic paraplegia. 31444388 2019
Entrez Id: 118813
Gene Symbol: ZFYVE27
ZFYVE27
0.020 GeneticVariation disease BEFREE Mutations in the protrudin gene (ZFYVE27) are associated with hereditary spastic paraplegia, an axonopathy that results from defective ER structure. 31406056 2019
Entrez Id: 4099
Gene Symbol: MAG
MAG
0.010 GeneticVariation disease BEFREE Hereditary spastic paraplegia and prominent sensorial involvement: think MAG mutations! 31402626 2019
Entrez Id: 5832
Gene Symbol: ALDH18A1
ALDH18A1
0.020 Biomarker disease BEFREE P5CS expression study in a new family with ALDH18A1-associated hereditary spastic paraplegia SPG9. 31402623 2019